Interaction pockets of CF with protein model (4ZRS) with docking energies, inhibition constants, positions and amino acids involved in H-bonding, and H-bond lengths.
∆Gbinding: Free binding energy between the phosphatase pocket and chlorpyrifos (CF); Kinhibition: inhibition constant reflecting the stability of the enzyme-ligand conformer; H-bond: amino acids that establish hydrogen bonds with CF; Spacing: H-bond length.
The authors declare that they have no conflicts of interest.
Ethical approval
Not applicable.
Consent to participate
Not applicable.
Consent to publication
Not applicable.
Availability of data and materials
The data that support the findings of this study are available from the corresponding authors, ADR and AIS, upon reasonable request.
Funding
This work was supported by the National University of Mar del Plata [Project EXA 1013/20]. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
Open Exploration maintains a neutral stance on jurisdictional claims in published institutional affiliations and maps. All opinions expressed in this article are the personal views of the author(s) and do not represent the stance of the editorial team or the publisher.
References
Yuan S, Li C, Yu H, Xie Y, Guo Y, Yao W. Screening of lactic acid bacteria for degrading organophosphorus pesticides and their potential protective effects against pesticide toxicity.LWT. 2021;147:111672. [DOI]
Yadav IC, Devi NL, Syed JH, Cheng Z, Li J, Zhang G, et al. Current status of persistent organic pesticides residues in air, water, and soil, and their possible effect on neighboring countries: a comprehensive review of India.Sci Total Environ. 2015;511:123–37. [DOI] [PubMed]
Sharma J, Satya S, Kumar V, Tewary DK. Dissipation of pesticides during bread-making.Chem Health Saf. 2005;12:17–22. [DOI]
Theriot CM, Grunden AM. Hydrolysis of organophosphorus compounds by microbial enzymes.Appl Microbiol Biotechnol. 2011;89:35–43. [DOI] [PubMed]
Urióstegui-Acosta M, Tello-Mora P, Solís-Heredia MJ, Ortega-Olvera JM, Piña-Guzmán B, Martín-Tapia D, et al. Methyl parathion causes genetic damage in sperm and disrupts the permeability of the blood-testis barrier by an oxidant mechanism in mice.Toxicology. 2020;438:152463. [DOI] [PubMed]
Pinto GDA, Castro IM, Miguel MAL, Koblitz MGB. Lactic acid bacteria - Promising technology for organophosphate degradation in food: A pilot study.LWT. 2019;110:353–9. [DOI]
Azam SMR, Ma H, Xu B, Devi S, Siddique MAB, Stanley SL, et al. Efficacy of ultrasound treatment in the removal of pesticide residues from fresh vegetables: A review.Trends Food Sci Technol. 2020;97:417–32. [DOI]
Kulshrestha G, Kumari A. Fungal degradation of chlorpyrifos by Acremonium sp. strain (GFRC-1) isolated from a laboratory-enriched red agricultural soil.Biol Fertil Soils. 2011;47:219–25. [DOI]
Singh DP, Khattar JI, Nadda J, Singh Y, Garg A, Kaur N, et al. Chlorpyrifos degradation by the cyanobacterium Synechocystis sp. strain PUPCCC 64.Environ Sci Pollut Res Int. 2011;18:1351–9. [DOI] [PubMed]
Liu T, Xu S, Lu S, Qin P, Bi B, Ding H, et al. A review on removal of organophosphorus pesticides in constructed wetland: Performance, mechanism and influencing factors.Sci Total Environ. 2019;651:2247–68. [DOI] [PubMed]
Cho KM, Math RK, Islam SM, Lim WJ, Hong SY, Kim JM, et al. Biodegradation of chlorpyrifos by lactic acid bacteria during kimchi fermentation.J Agric Food Chem. 2009;57:1882–9. [DOI] [PubMed]
Dorđević TM, Siler-Marinković SS, Durović-Pejčev RD, Dimitrijević-Branković SI, Gajić Umiljendić JS. Dissipation of pirimiphos-methyl during wheat fermentation by Lactobacillus plantarum.Lett Appl Microbiol. 2013;57:412–9. [DOI] [PubMed]
Zhang YH, Xu D, Zhao XH, Song Y, Liu YL, Li HN. Biodegradation of two organophosphorus pesticides in whole corn silage as affected by the cultured Lactobacillus plantarum.3 Biotech. 2016;6:73. [DOI] [PubMed] [PMC]
Zhang YH, Xu D, Liu JQ, Zhao XH. Enhanced degradation of five organophosphorus pesticides in skimmed milk by lactic acid bacteria and its potential relationship with phosphatase production.Food Chem. 2014;164:173–8. [DOI] [PubMed]
Suganthi M, Elango KP. Binding of organophosphate insecticides with serum albumin: multispectroscopic and molecular modelling investigations.Phys Chem Liq. 2017;55:165–78. [DOI]
Yazdi F, Minai-Tehrani D, Jahngirvand M, Almasirad A, Mousavi Z, Masoud M, et al. Functional and structural changes of human erythrocyte catalase induced by cimetidine: proposed model of binding.Mol Cell Biochem. 2015;404:97–102. [DOI] [PubMed]
Chen Y, Ying T. Isolation and Identification of Lactic Acid Bacteria from Xiaoshan Pickle Radish, a Traditional Fermented Vegetable.Food Sci Technol Res. 2017;23:129–36. [DOI]
Pegoraro CN, Harner T, Su K, Chiappero MS. Assessing levels of POPs in air over the South Atlantic Ocean off the coast of South America.Sci Total Environ. 2016;571:172–7. [DOI] [PubMed]
Ahir UN, Vyas TK, Gandhi KD, Faldu PR, Patel KG. In Vitro Efficacy for Chlorpyrifos Degradation by Novel Isolate Tistrella sp. AUC10 Isolated from Chlorpyrifos Contaminated Field.Curr Microbiol. 2020;77:2226–32. [DOI] [PubMed]
Sasikala C, Jiwal S, Rout P, Ramya M. Biodegradation of chlorpyrifos by bacterial consortium isolated from agriculture soil.World J Microbiol Biotechnol. 2012;28:1301–8. [DOI] [PubMed]
Thengodkar RR, Sivakami S. Degradation of Chlorpyrifos by an alkaline phosphatase from the cyanobacterium Spirulina platensis.Biodegradation. 2010;21:637–44. [DOI] [PubMed]
Wilkinson JH, Boutwell JH, Winsten S. Evaluation of a new system for the kinetic measurement of serum alkaline phosphatase.Clin Chem. 1969;15:487–95. [DOI] [PubMed]
Haque AM, Hwang CE, Kim SC, Cho DY, Lee HY, Cho KM, et al. Biodegradation of organophosphorus insecticides by two organophosphorus hydrolase genes (opdA and opdE) from isolated Leuconostoc mesenteroides WCP307 of kimchi origin.Process Biochem. 2020;94:340–8. [DOI]
Specht W, Pelz S, Gilsbach W. Gas-chromatographic determination of pesticide residues after clean-up by gel-permeation chromatography and mini-silica gel-column chromatography.Anal Bioanal Chem. 1995;353:183–90. [DOI] [PubMed]
Xu G, Zheng W, Li Y, Wang S, Zhang J, Yan Y. Biodegradation of chlorpyrifos and 3,5,6-trichloro-2-pyridinol by a newly isolated Paracoccus sp. strain TRP.Int Biodeterior Biodegrad. 2008;62:51–6. [DOI]
Ajaz M, Rasool SA, Sherwani Sk, Ali TA. High Profile Chlorpyrifos Degrading Pseudomonas putida MAS-1 from Indigenous Soil: Gas Chromatographic Analysis and Molecular Characterization.IJBMSP. 2012;2:58–61.
Tang X, Yang Y, Huang W, McBride MB, Guo J, Tao R, et al. Transformation of chlorpyrifos in integrated recirculating constructed wetlands (IRCWs) as revealed by compound-specific stable isotope (CSIA) and microbial community structure analysis.Bioresour Technol. 2017;233:264–70. [DOI] [PubMed]
Bosu S, Rajamohan N, Al Salti S, Rajasimman M, Das P. Biodegradation of chlorpyrifos pollution from contaminated environment - A review on operating variables and mechanism.Environ Res. 2024;248:118212. [DOI] [PubMed]
Aprea C, Colosio C, Mammone T, Minoia C, Maroni M. Biological monitoring of pesticide exposure: a review of analytical methods.J Chromatogr B Analyt Technol Biomed Life Sci. 2002;769:191–219. [DOI] [PubMed]
Menger F, Boström G, Jonsson O, Ahrens L, Wiberg K, Kreuger J, et al. Identification of Pesticide Transformation Products in Surface Water Using Suspect Screening Combined with National Monitoring Data.Environ Sci Technol. 2021;55:10343–53. [DOI] [PubMed] [PMC]
Zhou XW, Zhao XH. Susceptibility of nine organophosphorus pesticides in skimmed milk towards inoculated lactic acid bacteria and yogurt starters.J Sci Food Agric. 2015;95:260–6. [DOI] [PubMed]
Li C, Ma Y, Mi Z, Huo R, Zhou T, Hai H, et al. Screening for Lactobacillus plantarum Strains That Possess Organophosphorus Pesticide-Degrading Activity and Metabolomic Analysis of Phorate Degradation.Front Microbiol. 2018;9:2048. [DOI] [PubMed] [PMC]
Yuan S, Yang F, Yu H, Xie Y, Guo Y, Yao W. Biodegradation of the organophosphate dimethoate by Lactobacillus plantarum during milk fermentation.Food Chem. 2021;360:130042. [DOI] [PubMed]
Sok V, Fragoso A. Kinetic, spectroscopic and computational docking study of the inhibitory effect of the pesticides 2,4,5-T, 2,4-D and glyphosate on the diphenolase activity of mushroom tyrosinase.Int J Biol Macromol. 2018;118:427–34. [DOI] [PubMed]
Chu YH, Li Y, Wang YT, Li B, Zhang YH. Investigation of interaction modes involved in alkaline phosphatase and organophosphorus pesticides via molecular simulations.Food Chem. 2018;254:80–6. [DOI] [PubMed]
Wang L, Liu Z, Zhang J, Wu Y, Sun H. Chlorpyrifos exposure in farmers and urban adults: Metabolic characteristic, exposure estimation, and potential effect of oxidative damage.Environ Res. 2016;149:164–70. [DOI] [PubMed]
Ishag AE, Abdelbagi AO, Hammad AM, Elsheikh EA, Elsaid OE, Hur JH, et al. Biodegradation of Chlorpyrifos, Malathion, and Dimethoate by Three Strains of Bacteria Isolated from Pesticide-Polluted Soils in Sudan.J Agric Food Chem. 2016;64:8491–8. [DOI] [PubMed]
