A whole repertoire of miRNA resources

DatabasesOrganismSpecificationWeblinkReferences
miRNAMapHuman, rat, fly, worm, chicken, mousemiRNAs and target genes experimentally verifiedhttp://mirnamap.mbc.nctu.edu.tw/[99, 100]
microRNA.orgHuman, mouseTarget predictions of miRNAhttp://www.microrna.org[101]
PMTEDPlantsMicroarray studies have revealed expression patterns of miRNA targetshttp://pmted.agrinome.org[95]
MtiBaseHuman, mousemiRNA-binding sites located at 5’ UTR/CDShttp://mtibase.sysu.edu.cn[102]
miRGatorHumanExpression profiles, miRNA diversity, target relationshiphttp://mirgator.kobic.re.kr[103, 104]
SomamiR DB 2.0HumanSomatic-mutations in miRNAs and their target-site in cancerhttp://compbio.uthsc.edu/SomamiR[105]
PhenomiRHumanExpression of miRNAs differentially regulated in diseaseshttp://mips.helmholtz-muenchen.de/phenomir[106]
DIANA miRGen v3.0Human, rat, mouseCell line specific genes transcription-start-sites (TSSs) of miRNAhttp://www.microrna.gr/mirgen[107]
PASmiRPlantsA Web-accessible and literature-curated databasehttp://hi.ustc.edu.cn:8080/PASmiR[108]
DIANA TarBaseAnimals, plants, virusExperimentally validated miRNA and gene interactionshttp://www.microrna.gr/tarbase[109]
miR2DiseaseHumanDeregulation of miRNAs in various human diseaseshttp://www.mir2disease.org/[110]
mimiRNAHumanExpressions-profile data of miRNA over various cell lines and tissueshttp://mimirna.centenary.org.au[111]
StarBaseHuman, mousemiRNAs, competing endogenous RNAs (ceRNAs), pan-cancer and interactions network of long ncRNAs and mRNAs from a large-scale CLIP-sequence datahttp://starbase.sysu.edu.cn/[112, 113]