TE-derived microRNAs, whose expression is increased in glioblastoma development.
| No. | MicroRNA, expression changes | TE source [11] | Where microRNA was determined | Mechanism of influence on GB/target genes (miRDB) |
|---|---|---|---|---|
| 1 | miR-28-5p, ↑ [54, 98] | LINE2 | GB samples, GB cell lines [54, 98] | Inhibition of FOXO1 tumor suppressor [98] |
| 2 | miR-151a, ↑ [54] | LINE2 | GB samples [54] | AGO2, RPS6KA5, ME1, YTHDF3, PITPNA, CASD1, CLASP2 |
| 3 | miR-320d, ↑ [99] | LINE1 | GB samples [99] | YOD1, CDKL5, ONECUT2, SPOPL, SH2B3, KITLG, GPBP1 |
| 4 | hsa-miR-330-5p, ↑ [76] | SINE/MIR | GB samples [76] | CEP85, GPD2, LETM2, PALM, YBY, ETS1, UBXN10, KCNIP2 |
| 5 | miR-340-5p, ↑ [100] | DNA/TcMar-Mariner | Blood [100] | GTF2E2 [101] |
| 6 | miR-374b-3p, ↑ [102] | LINE2 | GB cell lines [102] | Stimulation of M2 macrophage polarization [102] |
| 7 | miR-374b-5p, ↑ [103] | LINE2 | GB cell lines [103] | GATA3, SEMA3B silencing [103] |
| 8 | miR-548b, ↑ [104] | DNA/TcMar-Mariner | GB samples [104] | FoxM1 inhibition [104] |
| 9 | miR-548o-3p, ↑ [84] | DNA/TcMar-Mariner | Blood [84] | TRAPPC8, CASP8AP2, GPM6A, STRN, GLI3, ZMAT1, ZBTB44, CNTNAP4 |
| 10 | miR-571, ↑ [84] | LINE1 | Blood [84] | REG1A, LAMA1, ZNF426, KCNH7, SCRT2, SPAG8 |
| 11 | miR-582-5p, ↑ [105] | LINE/CR1 | GB samples, GB cell lines [105] | Prevents apoptosis; Bim, caspase 3 and caspase 9 inhibition [105] |
| 12 | miR-603, ↑ [106] | DNA/TcMar-Mariner | GB samples, GB cell lines [106] | CTNNBIP1 and WIF1 inhibition [106] |
| 13 | miR-626, ↑ [107] | LINE1 | Blood serum [107] | PAPOLB, DPY19L3, CDH13, BCL11A, SLAMF7, SMCP |
| 14 | miR-640, ↑ [108] | SINE/MIR | GB samples, GB cell lines [108] | SLIT1 inhibition [108] |
| 15 | miR-1246, ↑ [109] | LTR/ERVL-MaLR | Plasma and GB exosomes [109] | Stimulation of differentiation myeloid suppressor cells [109] |
| 16 | miR-1290, ↑ [110] | DNA/TcMar-Tigger | GB samples [110] | SGO1, RTKN2, HTRA3, OSBPL6, EHHADH, PALM2-AKAP2, AKAP2, ACER3 |
| 17 | miR-4431, ↑ [84] | ERVL-MaLR | Blood [84] | MITD1, PRAMEF26, SIX3, RNF111, CATSPERZ |
| 18 | miR-4448, ↑ [111] | LTR/ERVK | GB cell lines [111] | PAN3, FAM177A1, ARID2, BPTF, CHD2, SOX7, ZNFX1 |
| 19 | miR-4703-3p, ↑ [84] | DNA/TcMar-Tigger | Blood [84] | CLDN20, EXTL2, CDYL, ZNF239, PHF12, ZNF470, SATL1, DYNAP, MITF |
| 20 | miR-6088, ↑ [112] | SINE/Alu | GB samples, GB cell lines [112] | SMARCB1 inhibition [112] |
↑: increased expression; TE: transposable element; GB: glioblastoma; SINE: short interspersed nuclear element; ERVL: endogenous retrovirus L; MaLR: mammalian apparent LTR-retrotransposon.
RM: Conceptualization, Data curation, Formal analysis, Investigation, Methodology, Writing—original draft, Writing—review & editing. The author read and approved the submitted version.
The author declares he has no conflict of interest.
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