From:  Post-CDK4/6 inhibitor therapy in HR+/HER2– advanced breast cancer: expanding options and persisting uncertainties

 Biomarker testing in positive, randomized phase III trials in the post-CDK4/6i setting in advanced, HR+/HER2– breast cancer.

TrialBiomarkerSpecimen source and timing for biomarker testingBiomarker assessment siteStratified according to biomarkerAssayIncluded alterationsRule for assignment of biomarker-indeterminate patientsPatient distribution according to biomarker status (% of ITT)
VIKTORIA-1 [86]PIK3CA-WTArchival or fresh biopsy. If neither available: ctDNA from blood samplesCentralNA1Therascreen PIK3CA Rotor-Gene Q PCR test (QIAGEN)10 PIK3CA mutations: C420R, E542K, E545A, E545D [1635G>T only], E545G, E545K, Q546E, H1047L, H1047R, H1047YIdentified PIK3CA status was an inclusion criterionIdentified PIK3CA status was an inclusion criterion
CAPItello-291 [82]PIK3CA, AKT1, PTENTumor tissue from the most recently collected tumor sample (primary or recurrent)CentralNoChina:
OncoScreen Plus (Burning Rock Biotech)
All other countries:
FoundationOne CDx (Foundation Medicine)
Activating mutations in PIK3CA and AKT1 and inactivating alterations in PTEN genesPatients without a qualifying alteration or with an unknown test result were included in the AKT pathway-non-altered population40.8% with confirmed AKT pathway alterations
59.2% without confirmed AKT pathway alterations (of which 25.3% had an unknown AKT pathway alteration status)
VERITAC-2 [52]ESR1ctDNA from pretreatment blood samples (prior to randomization)Central (for some patients: local laboratory results were used)YesChina:
NGS by Origmed
All other countries:
NGS by Foundation Medicine
Not reportedPatients with non-informative ESR1 test (result “unknown”) were stratified as patients without ESR1 mutation43.3% with ESR1 mutation
56.7% without ESR1 mutation (percentage of patients with a possibly unknown result not reported)
EMERALD [41]ESR1ctDNA in blood samples at screeningCentralYesGuardant360 CDx (Guardant Health)ESR1 missense mutations in codons 310–547Patients without detectable ctDNA in the blood sample/where ESR1 status could not be determined are included in the group of patients without ESR1 mutation47.8% with ESR1 mutation
52.2% without ESR1 mutation (percentage of patients without detectable ctDNA not reported)
EMBER-3 [46] (Imlunestrant vs. Fulvestrant)ESR1ctDNA in blood samples before treatment administration (after randomization)CentralNoChina:
OncoCompass Target (Burning Rock Biotech)
All other countries:
Guardant360 CDx (Guardant Health)
34 ESR1 variants annotated as oncogenic or likely oncogenic by the OncoKB databasePatients without detectable ctDNA or with an unknown ESR1 mutation status (analytical failure, missing sample) are included in the group of patients without ESR1 mutation38.7% with ESR1 mutation
58.2% without ESR1 mutation (of which 5% have an unknown ESR1 mutation status)
PADA-1 [57, 58]ESR1ctDNA in blood samples at inclusion and repeatedly (during surveillance2 period: every 2 cycles)CentralNA1Multiplex ddPCR (QX200 system; Bio-Rad Laboratories, Marnes-la-Coquette, France)ESR1 mutations in hotspot codons 380, 536, 537, and 538Rising ESR1 mutation was an inclusion criterionRising ESR1 mutation was an inclusion criterion
After randomization3: 46.6% of patients had no ESR1 mutation detected in pretreatment sample
SERENA-6 [45]ESR1ctDNA in blood samples at inclusion and repeatedly (during surveillance2 period: every 2–3 months)CentralNA1Guardant360 CDx (Guardant Health)11 ESR1 mutations E380Q, V422del, S463P, L536H, L536P, L536R, Y537C, Y537D, Y537N, Y537S, D538GESR1 mutation was an inclusion criterionESR1 mutation was an inclusion criterion
DESTINY-Breast06 [97]HER2-low HER2-ultralowTissue sample at time of metastatic disease or later (most recent pre-randomization tumor sample)CentralYes (HER2-low vs. ultralow)VENTANA HER2/neu (4B5) assayHER2-low: IHC 1+ or IHC 2+ and ISH−
HER2-ultralow: IHC 0 with membrane staining; also known as IHC > 0 and < 1+
HER2-low or HER2-ultralow status was an inclusion criterion81.8% HER2-low
17.6% HER2-ultralow

Biomarker testing strategies and ascertainment rules in randomized phase III trials in the post-CDK4/6i setting. Trials are presented in which a primary endpoint was evaluated in a prospectively defined biomarker-selected population. Only trials reported as full publications were included. Data presented in this table were derived exclusively from the original or follow-up study report or protocol, no additional sources were consulted. 1 Only biomarker-defined patients were included in the study; 2 during the surveillance period, patients were monitored for ESR1. In case of rising (PADA-1) or detection (SERENA-6) of ESR1 mutation, patients were randomized to the respective treatments; 3 after randomization, ESR1 testing was repeated before treatment initiation, referred to as the pretreatment sample. CDK4/6i: CDK4/6 inhibitor; ctDNA: circulating tumor DNA; ddPCR: droplet digital polymerase chain reaction; IHC: immunohistochemistry; ISH: in situ hybridization; ITT: intention-to-treat; NA: not applicable; NGS: next-generation sequencing; WT: wild-type.