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<front>
<journal-meta>
<journal-id journal-id-type="nlm-ta">Explor Med</journal-id>
<journal-id journal-id-type="publisher-id">EM</journal-id>
<journal-title-group>
<journal-title>Exploration of Medicine</journal-title>
</journal-title-group>
<issn pub-type="epub">2692-3106</issn>
<publisher>
<publisher-name>Open Exploration Publishing</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.37349/emed.2025.1001278</article-id>
<article-id pub-id-type="manuscript">1001278</article-id>
<article-categories>
<subj-group>
<subject>Review</subject>
</subj-group>
</article-categories>
<title-group>
<article-title>The regenerating gene (<italic>Reg</italic>) family genes in inflammatory bowel disease (IBD)</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-4066-0199</contrib-id>
<name>
<surname>Takasawa</surname>
<given-names>Shin</given-names>
</name>
<role content-type="https://credit.niso.org/contributor-roles/conceptualization/">Conceptualization</role>
<role content-type="https://credit.niso.org/contributor-roles/writing-original-draft/">Writing—original draft</role>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/">Writing—review &amp; editing</role>
<role content-type="https://credit.niso.org/contributor-roles/supervision/">Supervision</role>
<role content-type="https://credit.niso.org/contributor-roles/validation/">Validation</role>
<xref ref-type="aff" rid="I1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="cor1">
<sup>*</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Uchiyama</surname>
<given-names>Tomoko</given-names>
</name>
<role content-type="https://credit.niso.org/contributor-roles/writing-review-editing/">Writing—review &amp; editing</role>
<role content-type="https://credit.niso.org/contributor-roles/supervision/">Supervision</role>
<role content-type="https://credit.niso.org/contributor-roles/validation/">Validation</role>
<xref ref-type="aff" rid="I2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Takeda</surname>
<given-names>Maiko</given-names>
</name>
<xref ref-type="aff" rid="I2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="editor">
<name>
<surname>Wang</surname>
<given-names>Zeneng</given-names>
</name>
<role>Academic Editor</role>
<aff>Cleveland Clinic, USA</aff>
</contrib>
</contrib-group>
<aff id="I1">
<sup>1</sup>Department of Biochemistry, Nara Medical University, Kashihara 634-8521, Japan</aff>
<aff id="I2">
<sup>2</sup>Department of Diagnostic Pathology, Nara Medical University, Kashihara 634-8522, Japan</aff>
<author-notes>
<corresp id="cor1">
<bold>
<sup>*</sup>Correspondence:</bold> Shin Takasawa, Department of Biochemistry, Nara Medical University, Kashihara 634-8521, Japan. <email>shintksw@naramed-u.ac.jp</email></corresp>
</author-notes>
<pub-date pub-type="collection">
<year>2025</year>
</pub-date>
<pub-date pub-type="epub">
<day>05</day>
<month>02</month>
<year>2025</year>
</pub-date>
<volume>6</volume>
<elocation-id>1001278</elocation-id>
<history>
<date date-type="received">
<day>12</day>
<month>06</month>
<year>2024</year>
</date>
<date date-type="accepted">
<day>21</day>
<month>12</month>
<year>2024</year>
</date>
</history>
<permissions>
<copyright-statement>© The Author(s) 2025.</copyright-statement>
<license xlink:href="https://creativecommons.org/licenses/by/4.0/">
<license-p>This is an Open Access article licensed under a Creative Commons Attribution 4.0 International License (<ext-link ext-link-type="uri" xlink:href="https://creativecommons.org/licenses/by/4.0/">https://creativecommons.org/licenses/by/4.0/</ext-link>), which permits unrestricted use, sharing, adaptation, distribution and reproduction in any medium or format, for any purpose, even commercially, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.</license-p>
</license>
</permissions>
<abstract>
<p id="absp-1">Regenerating gene (<italic>Reg</italic>) was first isolated in 1988 and proposed to be specifically expressed in rat regenerating pancreatic islets. Since then, many genes homologous to <italic>Reg</italic> have been discovered in other species, including humans, mice, hamsters, rabbits, sheep, dogs, cats, pigs, giant pandas, chickens, and frogs. Moreover, <italic>Reg</italic> and its related genes (<italic>Reg</italic> family genes) have been classified as types I, II, III, and IV. They are closely associated with cell and tissue regeneration, cell proliferation, and anti-apoptosis in various tissues and cells including pancreatic β cells. In particular, focusing on the digestive organs and tissues, there have been reports that they play important roles not only in stomach, colon, liver, and pancreatic duct cancer, but also in intestinal epithelial cells, especially inflammatory bowel diseases (IBD), such as Crohn’s disease (CD) and ulcerative colitis (UC). This review describes and discusses the expression of <italic>Reg</italic> family genes in intestinal epithelial cells of those affected by IBD and the molecular mechanisms underlying this expression.</p>
</abstract>
<kwd-group>
<kwd>
<italic>Reg</italic> family genes</kwd>
<kwd>inflammatory bowel diseases (IBD)</kwd>
<kwd>Crohn’s disease</kwd>
<kwd>ulcerative colitis</kwd>
<kwd>pancreatic β cells</kwd>
<kwd>IL-6</kwd>
<kwd>IL-22</kwd>
<kwd>lipopolysaccharide (LPS)</kwd>
</kwd-group>
<funding-group>
<award-group id="award001">
<funding-source>
<institution-wrap>
<institution>Grant-in-Aid for Scientific Research</institution>
</institution-wrap>
</funding-source>
<award-id>08102003</award-id>
</award-group>
</funding-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p id="p-1">The lack or deficiency of functional insulin-producing pancreatic β cells has led to the development of diabetes. Replicating β cells are estimated to comprise only approximately 1% of the total β cells in the islets of <italic>Langerhans</italic>. Over 30 years of research into pancreatic β cell growth and regeneration research has shown that several growth factors act as mitogens that stimulate β cell proliferation [<xref ref-type="bibr" rid="B1">1</xref>]. Ninety percent of pancreatectomy rats had positive urine glucose excretion one to three months after surgery. The islets of <italic>Langerhans</italic> in the remaining pancreas of these rats were rare, small, and frequently showed fibrotic degeneration and degranulation [<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B3">3</xref>]. However, Yonemura et al. [<xref ref-type="bibr" rid="B4">4</xref>] showed that 90% of pancreatectomized rats treated daily with an intraperitoneal injection of poly(ADP-ribose) polymerase (PARP; EC 2.4.2.30) inhibitors, such as nicotinamide (pyridine-3-carboxamide) or 3-aminobenzamide, did not develop diabetes. Urinary glucose excretion levels were significantly reduced in rats treated with PARP inhibitors injection. The islets of <italic>Langerhans</italic> in the PARP inhibitor-injected rats were significantly larger than those in the control group [<xref ref-type="bibr" rid="B4">4</xref>]. The number of islets per square centimeter in 90% of pancreatectomized rats receiving PARP inhibitors was also larger than in rats without daily injections of PARP inhibitors [<xref ref-type="bibr" rid="B4">4</xref>]. Immunohistochemical staining of the remaining pancreas revealed that nearly the entire area of the enlarged islets in rats treated with PARP inhibitors was densely stained for insulin (β cells). On the other hand, glucagon-positive cells (α cells) were localized to the periphery of the enlarged islets of <italic>Langerhans</italic> in the remaining pancreas. Their quantity and localization of α cells in the enlarged islets were almost identical to those in normal rat pancreatic islets. These immunohistochemical findings indicate that the β cell population that was increased in the remaining pancreatic islets of rats treated with PARP inhibitors.</p>
<p id="p-2">Terazono et al. [<xref ref-type="bibr" rid="B5">5</xref>] isolated regenerating islets and constructed a λgt10 cDNA library from rat regenerating islets for searching mRNA(s) specifically expressed in regenerating islets. They found a novel gene encoding a 165 amino acid protein with a signal peptide sequence using differential hybridization of the cDNA library. This new gene was named regeneration gene (<italic>Reg</italic>) because it could contribute to pancreatic islet regeneration [<xref ref-type="bibr" rid="B5">5</xref>]. Terazono et al. [<xref ref-type="bibr" rid="B5">5</xref>–<xref ref-type="bibr" rid="B9">9</xref>] next isolated human counterpart from the human pancreas cDNA library and found human <italic>REG</italic> cDNA. The human <italic>REG</italic> cDNA showed a high degree of homology to the rat <italic>Reg</italic> (75% and 68% homology in nucleotides and amino acids, respectively). <italic>Reg</italic> gene expression was found in the regenerating pancreatic islets, but not in normal islets, livers, insulinomas induced by combined administration of streptozotocin (2-deoxy-2{methyl(nitroso)amino]carbonyl}amino)-<italic>β</italic>-<italic>D</italic>-glucopyranose) and nicotinamide, or regenerating liver induced by partial hepatectomy. <italic>Reg</italic> expression during islet regeneration in 90% partially pancreatectomized rats treated with nicotinamide increases one month after partial pancreatectomy, peaks at three months, and reaches nearly undetectable levels one year after surgery. The <italic>Reg</italic> gene was also expressed in the hyperplastic pancreatic islets of aurothioglucose (gold[I] [2<italic>S</italic>,3<italic>S</italic>,4<italic>R</italic>,5<italic>S</italic>]-3,4,5-trihydroxy-6-[hydroxymethyl]-oxane-2-thiolate)-injected type 2 diabetes models of non-obese non-diabetic (NON) mice [<xref ref-type="bibr" rid="B5">5</xref>]. <italic>Reg</italic> gene expression observed in both rat regenerating and NON mouse hyperplastic islets strongly suggests an involvement of the <italic>Reg</italic> gene in pancreatic β cell replication, growth, and maturation.</p>
<p id="p-3">Watanabe et al<italic>.</italic> [<xref ref-type="bibr" rid="B6">6</xref>] expressed recombinant rat Reg protein in a yeast expression system and purified it. When they administered the rat Reg protein (1 mg/kg/body weight per day) intraperitoneally to rats with 90% partial pancreatectomy, they observed an increase in the incorporation of [<sup>3</sup>H]thymidine into insulin-producing islet cells and frequent mitoses in the remaining pancreatic islets of <italic>Langerhans</italic> [<xref ref-type="bibr" rid="B10">10</xref>]. On postoperative days 30 and 60, fasting plasma glucose levels in 90% pancreatectomized rats injected daily with the recombinant Reg protein were significantly lower than those in 90% pancreatectomized control rats. After two months, nearly all islets of <italic>Langerhans</italic> in control rats with 90% partial resection of the pancreas without Reg protein administration were reduced, shrunken, and had irregular contours; fibrous degeneration and degranulation frequently occurred [<xref ref-type="bibr" rid="B4">4</xref>]. These observations are consistent with others in pancreatectomized animals [<xref ref-type="bibr" rid="B2">2</xref>].</p>
<p id="p-4">In contrast, the islets in rats treated with recombinant Reg protein were enlarged, and nearly all islets stained positive for insulin [<xref ref-type="bibr" rid="B10">10</xref>]. In addition, the administration of recombinant human REG (REG Iα) protein also increased β cell mass and improved diabetes in nonobese diabetic (NOD) mice, a typical mouse model of spontaneous type 1 diabetes [<xref ref-type="bibr" rid="B11">11</xref>]. Furthermore, human recombinant REG protein stimulates the uptake of 5’-bromo-2’-deoxyuridine (BrdU) into pancreatic β cells in a concentration-dependent manner in vitro. Anti-REG autoantibodies were detected in some diabetic patients’ serum, and the REG protein-induced incorporation of BrdU into β cells was significantly attenuated by adding diabetic patient serum containing anti-REG autoantibodies [<xref ref-type="bibr" rid="B12">12</xref>]. These results strongly suggest that the Reg protein increases replication, regeneration, and/or growth of pancreatic β cells, thereby alleviating diabetes.</p>
<p id="p-5">Unno et al. [<xref ref-type="bibr" rid="B13">13</xref>] constructed DNA that was ligated three copies of the rat insulin II promoter-mouse <italic>Reg I</italic> gene tandemly and microinjected the DNA into male pronuclei of fertilized mouse eggs to produce transgenic (Tg) mice. The [<sup>3</sup>H]thymidine incorporation in the insulin II promoter<italic>-Reg I</italic> Tg mouse islets from both males and females was significantly higher than that of the non-Tg control mouse islets [<xref ref-type="bibr" rid="B13">13</xref>]. The insulin II promoter<italic>-Reg I</italic> Tg mice were outcrossed to NOD female mice, and the resultant F1 male was backcrossed into NOD mice. Insulin II promoter<italic>-Reg I</italic> Tg-NOD and control NOD mice were generated by intercrossing nine backcrossings. The female insulin II promoter<italic>-Reg I</italic> Tg-NOD mice showed a significantly delayed onset of diabetes, ascertained based on at least two consecutive determinations of glucosuria compared to control female NOD mice without insulin II<italic>-Reg I</italic> Tg [<xref ref-type="bibr" rid="B13">13</xref>]. They also produced <italic>Reg I</italic> knockout (KO) mice by conventional homologous recombination in embryonic stem (ES) cells, and the pancreatic islets of KO mice showed a reduced [<sup>3</sup>H]thymidine incorporation in the islet cell nuclei [<xref ref-type="bibr" rid="B13">13</xref>]. When hyperplastic islets were induced by aurothioglucose (0.5 g/kg of body weight) injections in the KO and control mice to induce Reg I expression and hyperplastic islets, the islet volume, estimated by histochemical specimens, of the <italic>Reg I</italic> KO mice was significantly smaller than that of the aurothioglucose-injected control mice [<xref ref-type="bibr" rid="B13">13</xref>], indicating an essential role of endogenous Reg I in maintaining/increasing islet β cells. Liu and his colleagues produced <italic>Reg II</italic> KO mice. They found that the aging <italic>Reg II</italic> KO mice (13- to 14-month-old <italic>Reg II</italic> KO) developed glucose intolerance (high glucose levels in serum were observed at 30, 60, and 120 min after glucose injection) associated with decreased islet β cell ratio (the quantification of the percent of the islet area to total tissue showed a significant 60% decrease in <italic>Reg II</italic> KO mice) and serum insulin [<xref ref-type="bibr" rid="B14">14</xref>].</p>
<p id="p-6">As mentioned above, Reg proteins may function as autocrine or paracrine growth factors in pancreatic β cells. Because Reg protein is a secreted protein, it has been thought that a cell surface receptor in pancreatic islets must receive its proliferation signals. Its actual nature remains unknown. Kobayashi et al. [<xref ref-type="bibr" rid="B15">15</xref>] screened a λZAP II rat islet cDNA expression library and isolated Reg protein-binding protein (receptor) cDNA by binding to the <sup>125</sup>I-rat Reg protein. The cDNA contained an open reading frame of 2,760-base pairs encoding a 919-amino acid type II transmembrane protein [with a long extracellular domain (residues 52–919; 868 amino acid residues), a transmembrane domain (residues 29–51), and a short intracellular region at N terminus (residues 1–28)] with apparent molecular weight of 105,000, and the COS-7 cells into which the cDNA (cDNA in pCIneo mammalian expression vector) had been transfected and expressed bound the Reg protein with high affinity (<italic>K<sub>d</sub></italic> = 4.41 nM) [<xref ref-type="bibr" rid="B15">15</xref>]. Introducing the Reg protein receptor cDNA into rat RINm5F β cells significantly increased BrdU incorporation in the transformants and cell numbers in response to the Reg protein [<xref ref-type="bibr" rid="B15">15</xref>]. The primary structure of the rat cDNA was highly homologous to human multiple exostoses (<italic>EXT</italic>)-like genes—especially the human EXT-like gene 3 (<italic>EXTL3</italic>)/EXT-related gene 1 (<italic>EXTR1</italic>)—with an amino acid identity of over 97%, indicating that the 919-amino acid Reg protein receptor is encoded by the <italic>EXTL3</italic>/<italic>EXTR1</italic> gene and mediates Reg protein proliferation signals for β cell regeneration. After the report by Kobayashi et al. [<xref ref-type="bibr" rid="B15">15</xref>] that the <italic>Extl3/Extl1</italic> gene encodes a Reg receptor, Acquatella-Tran Van Ba et al. [<xref ref-type="bibr" rid="B16">16</xref>] reported that Extl3/Extl1 is a Reg receptor. Furthermore, several groups have also reported Extl3/Extl1 as a Reg protein receptor [<xref ref-type="bibr" rid="B8">8</xref>, <xref ref-type="bibr" rid="B9">9</xref>]. In later studies, additional discoveries about the Reg receptor were reported. The addition of Reg protein in the culture medium of rat RINm5F β cells resulted in the activation (phosphorylation) of transcription activating transcription factor 2 (ATF-2) [<xref ref-type="bibr" rid="B17">17</xref>]. β cell-specific disruption for the Reg receptor (<italic>Extl3</italic>) showed abnormal islet morphology accompanied by reduced β cell replication/proliferation observed by proliferating cell nuclear antigen (PCNA) positive β cells after one week of age [<xref ref-type="bibr" rid="B18">18</xref>].</p>
<p id="p-7">Reg receptor (<italic>Extl3</italic>) was expressed not only in pancreatic islets of <italic>Langerhans</italic> but in other cells and tissues, such as normal liver, heart, kidney, spleen, thymus, stomach, small intestine, colon, pancreatic acinar and ductal cells, adrenal gland, pituitary gland, testis, and brain [<xref ref-type="bibr" rid="B15">15</xref>, <xref ref-type="bibr" rid="B16">16</xref>]. This suggested the involvement of the Reg-Reg receptor signaling system for cell proliferation in a wide variety of cell types other than pancreatic β cells, such as epithelial cells in the small intestine and colon. Because <italic>Reg</italic> was found in the regenerating islets of <italic>Langerhans</italic>, <italic>Reg</italic> tends to be expressed in a limited number of cells under certain conditions. In contrast, Reg protein receptors were found to be expressed in a wide variety of cells. The Reg-Reg receptor signaling system was considered to be dependent on the expression of the <italic>Reg</italic> gene(s), but not the Reg receptor.</p>
<p id="p-8">Many <italic>Reg</italic> and <italic>Reg</italic>-related genes have been isolated (see <xref ref-type="fig" rid="fig1">Figure 1</xref>), and <italic>Reg</italic> and <italic>Reg</italic>-related genes constitute a multigene family, the <italic>Reg</italic> family [<xref ref-type="bibr" rid="B7">7</xref>–<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B19">19</xref>]. Based on the amino acid sequence of the Reg family proteins, the members of the Reg family were grouped into four subclasses: types I, II, III, and IV [<xref ref-type="bibr" rid="B7">7</xref>–<xref ref-type="bibr" rid="B9">9</xref>] (<xref ref-type="fig" rid="fig1">Figure 1</xref>). Recently, chimpanzee <italic>Reg Iα</italic> (XP_001163554.2), <italic>Reg Iβ</italic> (XP_001163951.4), <italic>Reg IIIα</italic> (XP_003816656.1), <italic>Reg IIIγ</italic> (XP_003816661.1) and <italic>Reg IV</italic> (XP_016780102.1), western lowland gorilla <italic>Reg Iα</italic> (XP_004029557.1), <italic>Reg IIIα</italic> (XP_055234895.1), <italic>Reg IIIγ</italic> (XP_055234615.1) and <italic>Reg IV</italic> (XP_055211509.1), Francois’s langur <italic>Reg Iα</italic> (XP_033031150.1), <italic>Reg Iβ</italic> (XP_033031147.1), <italic>Reg IIIα</italic> (XP_033032683.1) and <italic>Reg IV</italic> (XP_033053315.1), Sumatran orangutan <italic>Reg Iα</italic> (XP_002811895.2), <italic>Reg Iβ</italic> (XP_002811894.1), <italic>Reg IIIγ</italic> (XP_054332180.1) and <italic>Reg IV</italic> (XP_002810393.2), northern white-cheeked gibbon <italic>Reg Iα</italic> (XP_003282186.1), <italic>Reg Iβ</italic> (XP_003282184.2), <italic>Reg IIIα</italic> (XP_003268777.1) and <italic>Reg IV</italic> (XP_003268113.1), siamang <italic>Reg Iα</italic> (XP_055098489.1), <italic>Reg Iβ</italic> (XP_055097639.1) and <italic>Reg IIIγ</italic> (XP_055098377.1), pig-tailed macaque <italic>Reg Iα</italic> (XP_011712048.1), <italic>Reg IIIγ</italic> (XP_011712043.1), <italic>Reg IIIα</italic> (XP_011712050.1) and <italic>Reg IV</italic> (XP_011735163.1), silvery gibbon <italic>Reg Iα</italic> (XP_032034470.1), <italic>Reg Iβ</italic> (XP_032034469.1), <italic>Reg IIIα</italic> (XP_032033947.1) and <italic>Reg IIIγ</italic> (XP_032033085.1), golden snub-nosed monkey <italic>Reg Iα</italic> (XP_010378205.1), <italic>Reg IIIα</italic> (XP_010382870.1) and <italic>Reg IV</italic> (XP_010358951.1), cotton-top tamarin <italic>Reg Iα</italic> (KAK2092743.1), <italic>Reg Iβ</italic> (KAK2092742.1), <italic>Reg IIIα</italic> (KAK2092744.1) and <italic>Reg IIIγ</italic> (KAK2092740.1), crab-eating macaque <italic>Reg Iα</italic> (XP_005575526.1) and <italic>Reg Iβ</italic> (XP_005575530.1), green monkey <italic>Reg Iα</italic> (XP_007968256.1), <italic>Reg Iβ</italic> (XP_007968260.1), <italic>Reg IIIα</italic> (XP_007968253.1) and <italic>Reg IIIγ</italic> (XP_007968263.2), white-tufted-ear marmoset <italic>Reg Iα</italic> (XP_002757620.1), <italic>Reg Iβ</italic> (XP_002757622.1), <italic>Reg IIIγ</italic> (XP_035128030.1) and <italic>Reg IV</italic> (XP_017821669.3), sooty mangabey <italic>Reg Iα</italic> (XP_011941399.1), <italic>Reg IIIα</italic> (XP_011941401.1), <italic>Reg IIIγ</italic> (XP_011941395.1) and <italic>Reg IV</italic> (XP_011945315.1), Rhesus monkey <italic>Reg Iα</italic> (XP_014968213.1), <italic>Reg Iβ</italic> (NP_001181497.1), <italic>Reg IIIγ</italic> (XP_001112492.1) and <italic>Reg IV</italic> (XP_001084012.1), crab-eating macaque <italic>Reg Iα</italic> (XP_005575526.2) and <italic>Reg IIIα</italic> (XP_005575524.1), gelada <italic>Reg Iα</italic> (XP_025209412.1), <italic>Reg IIIα</italic> (XP_025210394.1), <italic>Reg IIIγ</italic> (XP_025210180.1) and <italic>Reg IV</italic> (XP_025244087.1), olive baboon <italic>Reg Iα</italic> (XP_021780704.1), <italic>Reg Iβ</italic> (XP_021780701.2), <italic>Reg IIIα</italic> (XP_021780706.1) and <italic>Reg IV</italic> (XP_021778575.2), Ma’s night monkey <italic>Reg Iα</italic> (XP_012307533.1), <italic>Reg Iβ</italic> (XP_012307535.1), <italic>Reg IIIγ</italic> (XP_012307641.1) and <italic>Reg IV</italic> (XP_021529810.1), tufted capuchin <italic>Reg Iα</italic> (XP_032099367.1), <italic>Reg Iβ</italic> (XP_032099369.1), <italic>Reg IIIα</italic> (XP_032099373.1), <italic>Reg IIIγ</italic> (XP_032099366.1) and <italic>Reg IV</italic> (XP_032127887.1), Panamanian white-faced capuchin <italic>Reg Iα</italic> (XP_017392173.1), <italic>Reg Iβ</italic> (XP_017392177.1), <italic>Reg IIIα</italic> (XP_017392178.1), <italic>Reg IIIγ</italic> (XP_017392170.1) and <italic>Reg IV</italic> (XP_017375266.1), Philippine tarsier <italic>Reg Iα</italic> (XP_008061466.1), <italic>Reg Iβ</italic> (XP_008061465.1) and <italic>Reg IV</italic> (XP_008062946.1), Bolivian squirrel monkey <italic>Reg Iα</italic> (XP_003922600.1), <italic>Reg Iβ</italic> (XP_003922602.1) and <italic>Reg IV</italic> (XP_039316867.1), Ugandan red Colobus <italic>Reg Iα</italic> (XP_026312216.1), <italic>Reg Iβ</italic> (XP_023043790.1), <italic>Reg IIIα</italic> (XP_023043801.1) and <italic>Reg IV</italic> (XP_023078498.1), slow loris <italic>Reg Iβ</italic> (XP_053445874.1), black snub-nosed monkey <italic>Reg Iβ</italic> (XP_017708014.1), <italic>Reg IIIα</italic> (XP_017739229.1) and <italic>Reg IV</italic> (XP_017719648.1), small-eared galago <italic>Reg Iβ</italic> (XP_012667807.1), gray mouse lemur <italic>Reg Iα</italic> (XP_012590838.1), <italic>Reg Iβ</italic> (XP_012590831.1), <italic>Reg IIIγ</italic> (XP_045405903.1) and <italic>Reg IV</italic> (XP_012617318.1), Cape golden mole <italic>Reg Iβ</italic> (XP_006873819.1), aardvark <italic>Reg IV</italic> (XP_007946661.1), bear <italic>Reg IIIβ</italic> (XP_026373137.1) and <italic>Reg IV</italic> (XP_008704575.1), takin <italic>Reg IV</italic> (XP_052494122.1), hamster <italic>Reg IIIβ</italic> (XM_021231969), <italic>Reg IIIγ</italic> (NM_001281579.1) and <italic>Reg IV</italic> (XM_021235470.2), squirrel <italic>Reg IV</italic> (XP_047389427.1), oryx <italic>Reg IV</italic> (XP_040086853.1), shrew <italic>Reg IIIα</italic> (XM_006169192.2), <italic>Reg IIIγ</italic> (XM_006169191.2) and <italic>Reg IV</italic> (XM_006166291.1), rabbit <italic>Reg IIIγ</italic> (XM_002709697.2) and <italic>Reg IV</italic> (XM_002715670.3), American pika <italic>Reg IV</italic> (XP_058516894.1), canine <italic>Reg IIIα</italic> (NM_001002945.3) and <italic>Reg IV</italic> (XM_038499361.1), dingo <italic>Reg IV</italic> (XP_025309107.1), raccoon dog <italic>Reg IIIβ</italic> (NP_001002945.2), <italic>Reg IIIγ</italic> (XP_055168716.1) and <italic>Reg IV</italic> (XP_055168118.1), red fox <italic>Reg IIIγ</italic> (XP_025850460.1) and <italic>Reg IV</italic> (XP_025844996.1), <italic>Cavia porcellus</italic> (guinea pig) <italic>Reg IIIβ</italic> (XM_003468964.1) and <italic>Reg IIIγ</italic> (XM_003468904.4), <italic>Bos taurus</italic> (bovine) <italic>Reg IIIα</italic> (NM_205787.1) and <italic>Reg IV</italic> (NM_001076986.1), <italic>Sus scrofa</italic> (porcine) <italic>Reg IIIγ</italic> (XM_005662419.3) and <italic>Reg IV</italic> (NM_001190251.1), <italic>Equus caballus</italic> (equine) <italic>Reg IIIγ</italic> (XM_001498171.6), <italic>Felis catus</italic> (ferine) <italic>Reg IV</italic> (XM_023259045.1), bobcat <italic>Reg IV</italic> (XP_046938644.1), sheep <italic>Reg IIIβ</italic> (NM_001038014.1), American wolverine <italic>Reg IV</italic> (KAI5761890.1), goat <italic>Reg IV</italic> (XP_005677839.1), deer <italic>Reg IV</italic> (XP_055259912.1), hippopotamus <italic>Reg IV</italic> (XP_057571303.1), Malayan pangolin <italic>Reg IV</italic> (XP_017505537.1), otter <italic>Reg IV</italic> (XP_047582626.1), beaver <italic>Reg IV</italic> (XP_020043589.1), giant pangolin <italic>Reg IV</italic> (KAK2495942.1), armadillo <italic>Reg IV</italic> (XP_012379915.1), giant panda <italic>Reg IV</italic> (XP_002928439.1), seal <italic>Reg IIIβ</italic> (XP_021554843.2) and <italic>Reg IIIγ</italic> (XP_006727443.1), sea lion <italic>Reg IIIβ</italic> (XP_027478978.1), walrus <italic>Reg IIIβ</italic> (XP_004411644.1), kangaroo <italic>Reg IIIβ</italic> (XM_013031828.1), Tasmanian devil <italic>Reg IV</italic> (XP_003769898.1), <italic>Suncus murinus</italic> (Asian house shrew) <italic>Reg IIIα</italic> (LC606672.1) and <italic>Reg IV</italic> (XP_049621912.1), <italic>Rhinolophus ferrumequinum</italic> (greater horseshoe bat) <italic>Reg IIIα</italic> (XM_033125205.1), <italic>Desmodus rotundus</italic> (common vampire bat) <italic>Reg IIIγ</italic> (XM_024558600.1) and <italic>Reg IV</italic> (XM_024570607.1), <italic>Gallus gallus domesticus</italic> (chicken) <italic>Reg IV</italic> (NM_001277527.1), <italic>Cotumix japonica</italic> (Japanese quail) <italic>Reg IV</italic> (XM_015869386.1) and <italic>Xenopus tropicalis</italic> (tropical clawed frog) <italic>Reg Iβ</italic> (XM_002934582.4) and <italic>Reg IV</italic> (XM_004915988.3) were isolated.</p>
<fig id="fig1" position="float">
<label>Figure 1</label>
<caption>
<p id="fig1-p-1">
<bold>Alignment of primary structures of the <italic>Reg</italic> gene family.</bold> Based on the amino acid sequences (adapted from [<xref ref-type="bibr" rid="B7">7</xref>–<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B19">19</xref>, <xref ref-type="bibr" rid="B70">70</xref>]), the <italic>Reg</italic> family is classified into four subclasses: types I, II, III, and IV. Dots indicate amino acids identical to human <italic>REG Iα</italic> in the alignment. Dashes indicate gaps in maximal alignment. Six conserved cysteines (C) in the mature proteins are depicted in red. Amino acid residues common to all the Reg family proteins other than the six cysteines are indicated by purple. Types I, II, and III <italic>Reg</italic> genes are clustered in a restricted region (~100 kbp) of the same chromosome [<xref ref-type="bibr" rid="B19">19</xref>, <xref ref-type="bibr" rid="B33">33</xref>, <xref ref-type="bibr" rid="B70">70</xref>]. The human <italic>REG</italic>-related sequence (RS) is omitted from the alignment because human RS is a pseudogene [<xref ref-type="bibr" rid="B6">6</xref>]. <italic>Reg</italic>: regenerating gene</p>
</caption>
<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="em-06-1001278-g001.tif" />
</fig>
<p id="p-9">Types I and II Reg proteins are expressed in islet β cell regeneration [<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B13">13</xref>, <xref ref-type="bibr" rid="B14">14</xref>]. However, type I Reg has been reported to be expressed in pancreatic β cells and human colorectal cancer, gastric mucosa, and enterochromaffin cells of water-immersion restraint rats [<xref ref-type="bibr" rid="B7">7</xref>–<xref ref-type="bibr" rid="B9">9</xref>]. Type III Reg proteins [pancreatitis-associated proteins (PAPs)] have been involved in the cellular proliferation of intestinal Paneth granule cells, hepatocellular carcinoma, pancreatic exocrine acinar cells, keratinocytes, and Schwann cells (neurolemmocytes); Reg family proteins have been implicated to function not only in pancreatic β cell regeneration. It has been suggested that Reg family protein(s) may be involved in the regeneration/anti-apoptosis of some other cells and tissues than that of pancreatic β cells [<xref ref-type="bibr" rid="B7">7</xref>–<xref ref-type="bibr" rid="B9">9</xref>]. Bréchot and his colleagues [<xref ref-type="bibr" rid="B20">20</xref>] produced mouse albumin promoter-HIP/PAP (human counterpart of <italic>Reg IIIβ</italic>) Tg mice. They found that liver regeneration after partial (70%) hepatectomy was accelerated in the albumin-HIP/PAP Tg mice.</p>
<p id="p-10">They also produced <italic>Reg IIIβ</italic> KO mice by homologous recombination and found that partial hepatectomy-induced liver regeneration of the KO mice was markedly impaired [<xref ref-type="bibr" rid="B21">21</xref>]. However, they did not report morphological and biochemical changes in pancreatic β cells and intestines of the Tg and KO mice. Most recently, Chen et al. [<xref ref-type="bibr" rid="B22">22</xref>] generated global KO mice for <italic>Reg I</italic>–<italic>III</italic> (<italic>Reg I</italic>, <italic>II</italic>, <italic>IIIα</italic>, <italic>IIIβ</italic>, <italic>IIIγ</italic>, and <italic>IIIδ</italic>) genes using the CRISPR/Cas9 system. The <italic>Reg I</italic>–<italic>III</italic> KO mice showed no abnormality in general growth, including pancreas development. However, the <italic>Reg I</italic>–<italic>III</italic> disrupted mice led to a reduction in pancreatic parenchymal loss, decreased deposition of collagen, and reduced expression of proinflammatory cytokines, such as interleukin (IL)-6, tumor necrosis factor (TNF)α, and IL-1β in chronic pancreatitis [<xref ref-type="bibr" rid="B22">22</xref>]. However, they did not analyze/report abnormalities in pancreatic β cells and intestines of the <italic>Reg I</italic>–<italic>III</italic> KO mice.</p>
<p id="p-11">Reg proteins are induced to express in pancreatic β cells/β cell precursors and function as autocrine/paracrine growth/anti-apoptosis factor(s) through the cell surface Reg protein receptor [<xref ref-type="bibr" rid="B7">7</xref>–<xref ref-type="bibr" rid="B10">10</xref>, <xref ref-type="bibr" rid="B15">15</xref>]. However, after the Reg protein binds to the receptor, it is uncertain how the intracellular molecular mechanisms (signal transduction mechanisms) of the Reg protein induce β cell regeneration/replication. Reg I was found to increase the phosphorylation of ATF-2, which binds to –57 to –52 of the cyclin D1 promoter [<xref ref-type="bibr" rid="B17">17</xref>]. The Reg I/ATF-2-induced cyclin D1 promoter activation was attenuated by phosphoinositide 3-kinase (PI(3)K; EC: 2.7.1.137) inhibitors, such as LY294002 (2-(Morpholin-4-yl)-8-phenyl-4<italic>H</italic>-1-benzopyran-4-one) and wortmannin (1α-(Methoxymethyl)-3,7,17-trioxo-2-oxa-6,4-(epoxymetheno)androsta-5,8-dien-11α-yl acetate) [<xref ref-type="bibr" rid="B17">17</xref>]. In <italic>Reg I</italic> KO mouse islets, the levels of phosphorylated ATF-2, cyclin D1, and phosphorylated retinoblastoma gene (<italic>Rb</italic>) product were reduced significantly, indicating that the Reg-Reg receptor system stimulates the PI(3)K/ATF-2/cyclin D1 signaling pathway to induce pancreatic β cell regeneration/anti-apoptosis [<xref ref-type="bibr" rid="B17">17</xref>].</p>
<p id="p-12">It has been shown that high concentrations of the Reg I protein (&gt; 300 nM) induce β cell apoptosis, and the hepatocyte growth factor (<italic>HGF</italic>) (&lt; 2.5 ng/mL) attenuates the β cell apoptosis [<xref ref-type="bibr" rid="B15">15</xref>, <xref ref-type="bibr" rid="B23">23</xref>, <xref ref-type="bibr" rid="B24">24</xref>]. During the characterization of the Reg receptor, high concentrations of the Reg I protein induced apoptosis in pancreatic β cells, while the combined addition of IL-6 and dexamethasone (Dx) prevented a high concentration of Reg I-induced β cell apoptosis. The combined addition of IL-6 (20 ng/L) and Dx (100 nM) also induced <italic>HGF</italic> expression in β cells, and <italic>HGF</italic> reduced the high concentration-Reg I-induced β cell apoptosis [<xref ref-type="bibr" rid="B15">15</xref>, <xref ref-type="bibr" rid="B23">23</xref>]. Yamaoka et al. [<xref ref-type="bibr" rid="B25">25</xref>]. reported that <italic>Reg I</italic> Tg mice were produced by <italic>Reg I</italic> cDNA under a glucagon promoter. Therefore, a glucagon-<italic>Reg I</italic> Tg line, which expresses much more Reg I than other lineages in pancreatic α cells, developed diabetes through apoptosis of pancreatic islet cells.</p>
</sec>
<sec id="s2">
<title>
<italic>Reg</italic> family gene expression in the gastrointestinal tract</title>
<p id="p-13">Numbers of the gene structures related to <italic>Reg</italic> were isolated from rats, mice, humans, and other species; they constitute a multigene family, the <italic>Reg</italic> gene family [<xref ref-type="bibr" rid="B7">7</xref>–<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B26">26</xref>]. Based on the primary structures of the encoded proteins of <italic>Reg</italic> and the structure-related genes, they are grouped into four subclasses: types I, II, III, and IV (<xref ref-type="fig" rid="fig1">Figure 1</xref>). In humans, four functional <italic>REG</italic> family genes, i.e., <italic>REG Iα</italic> [<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B6">6</xref>], <italic>REG Iβ</italic> [<xref ref-type="bibr" rid="B27">27</xref>], <italic>HIP</italic> [<xref ref-type="bibr" rid="B28">28</xref>]/<italic>PAP</italic> [<xref ref-type="bibr" rid="B29">29</xref>], and <italic>REG III</italic> [<xref ref-type="bibr" rid="B19">19</xref>], and a pseudogene [<italic>REG</italic>-related sequence (RS)] [<xref ref-type="bibr" rid="B6">6</xref>] are tandemly ordered in the 95 kbp region of chromosome 2p12 [<xref ref-type="bibr" rid="B30">30</xref>]. On the other hand, <italic>REG IV</italic> is located on a different chromosome, chromosome 1p12–13.1 [<xref ref-type="bibr" rid="B31">31</xref>, <xref ref-type="bibr" rid="B32">32</xref>]. In the mouse genome, the chromosomal localization of all the <italic>Reg</italic> family genes except <italic>Reg IV</italic>, namely <italic>Reg I</italic>, <italic>Reg II</italic>, <italic>Reg IIIα</italic>, <italic>Reg IIIβ</italic>, <italic>Reg IIIγ</italic>, and <italic>Reg IIIδ</italic>, was located in a contiguous 75 kbp region on chromosome 6C3 (in the order of <italic>Reg IIIβ</italic>-<italic>Reg IIIδ</italic>-<italic>Reg IIIα</italic>-<italic>Reg II</italic>-<italic>Reg I</italic>-<italic>Reg IIIγ</italic>) [<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B33">33</xref>]. The <italic>Reg IV</italic> (encoding Type IV Reg protein) gene was mapped to chromosome 3F3. Type I and type II Reg proteins are expressed in regenerating islets [<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B13">13</xref>, <xref ref-type="bibr" rid="B26">26</xref>] and are involved in β cell regeneration and neogenesis [<xref ref-type="bibr" rid="B10">10</xref>–<xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B34">34</xref>–<xref ref-type="bibr" rid="B36">36</xref>].</p>
<p id="p-14">Reg family proteins may be involved in the regeneration of insulin-producing cells and in cellular proliferation and regeneration in pancreatic exocrine acinar cells [<xref ref-type="bibr" rid="B37">37</xref>], gastrointestinal epithelial cells [<xref ref-type="bibr" rid="B38">38</xref>–<xref ref-type="bibr" rid="B45">45</xref>], hepatocytes [<xref ref-type="bibr" rid="B20">20</xref>, <xref ref-type="bibr" rid="B21">21</xref>, <xref ref-type="bibr" rid="B46">46</xref>–<xref ref-type="bibr" rid="B48">48</xref>], cardiovascular cells [<xref ref-type="bibr" rid="B8">8</xref>, <xref ref-type="bibr" rid="B9">9</xref>], salivary ductal epithelial cells [<xref ref-type="bibr" rid="B49">49</xref>–<xref ref-type="bibr" rid="B51">51</xref>], bone and muscle cells [<xref ref-type="bibr" rid="B52">52</xref>, <xref ref-type="bibr" rid="B53">53</xref>], and neuronal cells [<xref ref-type="bibr" rid="B16">16</xref>]. Mouse Reg IIIβ (PAP) has been considered as a Schwann cell (neurolemmocytes) mitogen that accompanies the regeneration of motor neurons [<xref ref-type="bibr" rid="B54">54</xref>] and functions as a neurotrophic factor for motor neurons [<xref ref-type="bibr" rid="B55">55</xref>, <xref ref-type="bibr" rid="B56">56</xref>].</p>
<p id="p-15">In 2000, a group from the St. James’s University Hospital in Leeds, UK reported that death of early colorectal cancer patients (18 patients in stage I and 60 patients in stage II; T<sub>1–2</sub>, N<sub>0</sub>M<sub>0</sub>) could be predicted using the <italic>REG</italic> family (<italic>REG Iα</italic> and <italic>HIP</italic>/<italic>PAP</italic>) gene expression [<xref ref-type="bibr" rid="B57">57</xref>]. In 2003, Yonemura et al. [<xref ref-type="bibr" rid="B58">58</xref>] reported that the <italic>REG Iα</italic> gene expression, detected using RT-PCR, immunofluorescent microscopy, and immunoblot analysis, was no relation detected between <italic>REG Iα</italic> mRNA status and serosal invasion, lymph node metastasis, lymphatic invasion, and macroscopic type. However, the <italic>REG Iα</italic> expression was closely related to the infiltrating property of gastric carcinomas and was a prognostic indicator of gastric differentiated adenocarcinoma. The four-year survival was shown to be significantly better in patients with <italic>REG Iα</italic>-negative gastric carcinomas than in those with <italic>REG Iα</italic>-positive carcinomas (91% vs. 51% survival, respectively; <italic>P</italic> &lt; 0.05). Since then, a correlation between <italic>REG</italic> family gene expression and cancer patient prognosis has been reported in gastric, esophageal, lung, head and neck, and colorectal carcinomas [<xref ref-type="bibr" rid="B59">59</xref>–<xref ref-type="bibr" rid="B65">65</xref>]. These observations strongly suggest that the expression of the <italic>Reg</italic> gene family engages in the proliferation/anti-apoptosis of a wide variety of cell types, including cancer cells.</p>
</sec>
<sec id="s3">
<title>
<italic>REG</italic> family gene expression in inflammatory bowel diseases</title>
<p id="p-16">Crohn’s disease (CD) and ulcerative colitis (UC), two major forms of inflammatory bowel diseases (IBD), are both characterized by chronic and destructive intestinal inflammation of unknown cause(s). Approximately one-third of IBD patients experience persistent irritable bowel syndrome (IBS)-like gastrointestinal symptoms despite the absence of objective evidence of disease activity and patients of IBD with an elevated risk of colorectal cancer(s). Despite advances in understanding the cellular/molecular mechanism(s) underlying IBD in intestinal mucosa over the past decade, the exact pathogenesis of IBD remains undefined.</p>
<p id="p-17">Overexpression of <italic>REG Iα</italic> and <italic>REG Iβ</italic> mRNA has been reported in resected colonic tissues taken from those with CD and UC [<xref ref-type="bibr" rid="B66">66</xref>]. We also showed the overexpression of <italic>HIP</italic>/<italic>PAP</italic> and <italic>REG III</italic> in IBD in resected colonic mucosa [<xref ref-type="bibr" rid="B38">38</xref>]. Overexpression of <italic>REG Iα</italic> mRNA and protein in UC, particularly dysplasia or cancer, and the possible role of REG Iα as a marker or exacerbating factor of UC-related tumors have also been reported.</p>
</sec>
<sec id="s4">
<title>
<italic>HIP</italic>/<italic>PAP</italic> and <italic>Reg III</italic> in IBD and mouse IBD models</title>
<p id="p-18">Microorganisms, such as enterobacteria, are involved in intestinal inflammation, including IBD. Still, it remains unclear which genes are expressed in response to luminal microbiota in intestinal epithelial cells and whether these genes are also involved in pathological mucosal inflammation. Germ-free mice were orally challenged with a bacterial suspension (freshly prepared fecal suspension) prepared from conventionally housed specific pathogen-free (SPF) mice (a process known as bacterial reconstitution). Thereafter, Ogawa et al. [<xref ref-type="bibr" rid="B38">38</xref>] conducted a differential display analysis to determine which gene expression in gut epithelial cells and found that <italic>Reg</italic> family genes as candidates. They dissolved dextran sulfate sodium (DSS), a synthetic sulfated branched polysaccharide derivative of dextran with a molecular weight of 36–50 kDa and multiple uses in biomedical and clinical research in drinking water and adjusted it to a concentration of 3%. One important property of DSS is that it triggers colitis in rodents (mice and rats) by binding to medium-chain-length fatty acids in the colon mucosa and inducing intestinal inflammation within 7–10 days.</p>
<p id="p-19">The mice were kept under SPF conditions and allowed free access to 3% DSS solution as drinking water for 5–10 days. The expression of the genes that had been identified by differential display was examined not only in a bacterial reconstitution model, a DSS-induced colitis model, and human IBD intestinal epithelial cells. Type III <italic>Reg</italic> family genes, especially <italic>Reg IIIβ</italic> and <italic>Reg IIIγ</italic>, were strongly induced in gut epithelial cells following bacterial reconstitution and drinking of DSS solution resulted in the colitis [<xref ref-type="bibr" rid="B38">38</xref>]. Recently, Shindo et al. [<xref ref-type="bibr" rid="B67">67</xref>] at Toho University produced <italic>Reg IIIβ</italic> KO mice using the CRISPR-Cas9 system and found that 1.5% DSS drinking-induced colitis, characterized by body weight loss and infiltration of neutrophils, was exacerbated in <italic>Reg IIIβ</italic> KO mice compared to wild-type control mice.</p>
<p id="p-20">The mRNA expression of <italic>HIP</italic>/<italic>PAP</italic>, a human counterpart of <italic>Reg IIIβ</italic> (see <xref ref-type="fig" rid="fig1">Figure 1</xref>), was increased in intestinal epithelial cells of patients with IBD. <italic>Reg IIIβ</italic> (<italic>PAP</italic>) expression was localized in mouse intestinal epithelial cells, including goblet cells and columnar cells. On the other hand, <italic>HIP</italic>/<italic>PAP</italic>-expressing cells were correlated with metaplasia of Paneth cells in the human colon. Epithelial expression of <italic>Reg IIIα</italic>, <italic>Reg IIIβ</italic>, and <italic>REG IIIγ</italic> in mice or <italic>HIP</italic>/<italic>PAP</italic> in IBD patients was induced under mucosal inflammation caused by exposure to resident bacteria or DSS and inflamed IBD colon [<xref ref-type="bibr" rid="B38">38</xref>].</p>
</sec>
<sec id="s5">
<title>
<italic>REG Iα</italic> and <italic>REG Iβ</italic> expression in IBD</title>
<p id="p-21">Progression and recovery in IBD depend on the balancing of mucosal damage and repair. Some of Reg family members have been reported to be expressed in CD and UC patients’ intestinal mucosa and to function as proliferative mucosal factors in IBD intestinal mucosa. However, it is still unclear whether all the <italic>REG</italic> family genes are expressed in IBD intestinal mucosa. Tsuchida et al. [<xref ref-type="bibr" rid="B43">43</xref>] analyzed the expression of all the functional <italic>REG</italic> family genes (<italic>REG Iα</italic>, <italic>REG Iβ</italic>, <italic>REG III</italic>, <italic>HIP</italic>/<italic>PAP</italic>, and <italic>REG IV</italic>) in biopsy specimens from UC and CD patients [88 IBD (49 CD and 39 UC) and 44 controls] using real-time RT-PCR. They found that <italic>REG Iα</italic>, <italic>REG Iβ</italic>, and <italic>REG IV</italic> genes were overexpressed in CD biopsy samples and that the <italic>REG IV</italic> gene was overexpressed in UC samples. On the other hand, the expression of type III human <italic>REG</italic> genes (<italic>REG III</italic> and <italic>HIP</italic>/<italic>PAP</italic>) was unchanged in the IBD colon samples compared to controls.</p>
<p id="p-22">IL-6 and IL-8 induced some <italic>REG</italic> family genes in colon epithelial cells. Several cytokines/growth factors such as IL-22, TNFα, IL-17A, basic fibroblast growth factor (bFGF), HGF, and epidermal growth factor (EGF), have also been reported to induce <italic>REG</italic> family mRNA(s) in several tissues and cells. To clarify whether the <italic>REG Iα</italic> gene is upregulated in response to cytokine(s)/growth factor(s) in intestinal epithelial cells, reporter plasmid(s) containing <italic>REG Iα</italic> promoter with firefly luciferase (EC 1.13.12.7) were constructed, and transfected them into colon epithelial cells (LS-174T and HT-29); the cells were stimulated by the cytokines/growth factors, and the promoter activities were measured. <italic>REG Iα</italic> transcription was increased by the addition of IL-6 (20 ng/mL) and/or IL-22 (20 ng/mL) [<xref ref-type="bibr" rid="B43">43</xref>]. To clarify the cis-element of <italic>REG Iα</italic> promoters (–1190 to +26) in response to IL-22 or IL-6, we constructed reporter plasmids fusing various lengths of <italic>REG Iα</italic> promoters to the luciferase gene, introduced them into human colon epithelial cells (LS-174T and HT-29), and measured the promoter activities. Progressive deletion down from –1190 to –220 in the <italic>REG Iα</italic> promoter did not alter the IL-22-induced promoter activities. However, additional deletions to –220 to –211, –179 to –156, and –146 to –130 caused significant decreases in the promoter activities, indicating that the regions contain cis-elements essential for the IL-22-induced <italic>REG Iα</italic> promoter activities.</p>
<p id="p-23">Each region has a putative transcription factor binding site for myeloid zinc finger 1 (<italic>MZF1</italic>) (also known as MZF1B, ZFP98, ZNF42, and ZSCAN6), related transcriptional enhancer factor-1 (<italic>RTEF1</italic>) [also known as TEF-3 or TEA domain transcription factor 4 (<italic>TEAD4</italic>)], and signal transducer and activator of transcription 3 (<italic>STAT3</italic>) (also known as ADMIO, APRF, and HIES), respectively [<xref ref-type="bibr" rid="B43">43</xref>]. The regions essential for the IL-22-induced <italic>REG Iα</italic> promoter activation were also responsible for the IL-6-induced <italic>REG Iα</italic> promoter activation. Therefore, IL-6-induced <italic>REG Iα</italic> expression occurs in the same mechanism as that of IL-22-induced <italic>REG Iα</italic> expression. To investigate the significance of <italic>MZF1</italic>, <italic>RTEF1</italic>/<italic>TEAD4</italic>, and <italic>STAT3</italic> in IL-22-induced <italic>REG Iα</italic> expression, we transfected small interfering RNA (siRNA) for <italic>MZF1</italic>, <italic>RTEF1</italic>/<italic>TEAD4</italic>, and <italic>STAT3</italic> [<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B44">44</xref>]. Introducing siRNAs abolished the IL-22-induced <italic>REG Iα</italic> expression [<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B44">44</xref>].</p>
<p id="p-24">In <italic>REG Iβ</italic> expression, IL-22 induced <italic>REG Iβ</italic> promoter activation, but the other cytokines/growth factors, including IL-6, did not. The –274 to –260 region was essential for the IL-22-induced <italic>REG Iβ</italic> expression, and that the region contains a putative binding site for helicase-like transcription factor (<italic>HLTF</italic>)/forkhead box N2 (<italic>FOXN2</italic>). To clarify the essential role of <italic>HLTF</italic>/<italic>FOXN2</italic> for <italic>REG Iβ</italic> expression, we found that the introduction of <italic>HLTF</italic>/<italic>FOXN2</italic> siRNA attenuated the IL-22-induced <italic>REG Iβ</italic> mRNA expression (<xref ref-type="fig" rid="fig2">Figure 2</xref>) [<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B44">44</xref>].</p>
<fig id="fig2" position="float">
<label>Figure 2</label>
<caption>
<p id="fig2-p-1">
<bold>A possible mechanism of <italic>REG</italic> <italic>I</italic><italic>α</italic> and <italic>REG I</italic><italic>β</italic> gene expression in IBD.</bold> The expression of <italic>REG Iα</italic> and <italic>REG Iβ</italic> was induced to protect/recover the intestinal epithelial cells from immune-mediated damage via the proliferation of intestinal epithelial cells in IBD. However, it may sometimes result in an increased risk of colorectal cancer significantly. Reduction of <italic>REG IV</italic> expression in response to TNFα may reduce the risk of colon cancer. MZF1: myeloid zinc finger 1; RTEF1: related transcriptional enhancer factor-1; STAT3: related transcriptional enhancer factor-1; <italic>REG</italic>: regenerating gene; HLTF: helicase-like transcription factor; GATA: GATA-binding transcription factor; TNF: tumor necrosis factor</p>
</caption>
<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="em-06-1001278-g002.tif" />
</fig>
<p id="p-25">In the <italic>REG IV</italic> promoter (–1053 to +22), no enhancement of promoter activity was detected following the addition of any of cytokine/growth factors (20 ng/mL IL-6, 10 nM IL-8, 1 μg/mL IL-17A, 20 ng/mL IL-22, 20 ng/mL TNFα, 50 ng/mL HGF, 10 nM bFGF, and 10 nM EGF) to LS-174T intestinal epithelial cells. However, <italic>REG IV</italic> promoter activity was significantly reduced by the addition of TNFα. We assessed the introduction of siRNAs for caudal-type homeobox protein 2 (<italic>CDX2</italic>), suppressor of cytokine signaling 3 (<italic>SOCS3</italic>), and GATA-binding factor 6 (<italic>GATA6</italic>), as <italic>CDX2</italic> and <italic>GATA6</italic> engaged in <italic>REG IV</italic> gene expression, and TNFα was reported to regulate <italic>SOCS3</italic> expression. <italic>GATA6</italic> siRNA introduction abolished the TNFα-induced reduction of <italic>REG IV</italic>, indicating that <italic>GATA6</italic> is an essential transcription factor for <italic>REG IV</italic> expression [<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B44">44</xref>]. We then searched targeted microRNA (miR) and its possible binding site(s) and found that mRNAs for <italic>REG IV</italic> and <italic>GATA6</italic> have a target sequence for <italic>miR-24</italic> and target sequences for <italic>miR-143</italic> and <italic>miR-363</italic>, respectively. The <italic>miR-24</italic>, <italic>-143</italic>, and -<italic>363</italic> measurements revealed that <italic>miR-363</italic> was increased by TNFα treatment [<xref ref-type="bibr" rid="B43">43</xref>, <xref ref-type="bibr" rid="B44">44</xref>].</p>
<p id="p-26">To clarify whether the expression of <italic>GATA6</italic> and <italic>REG IV</italic> in TNFα-treated cells is controlled by <italic>miR-363</italic>, <italic>miR-363 mimic</italic>, and <italic>miR-363 mimic NC</italic> were introduced into LS-174T cells just before TNFα treatment. The TNFα reduced <italic>GATA6</italic> and <italic>REG IV</italic> mRNAs were abolished by the introducing the <italic>miR-363 mimic</italic> (<xref ref-type="fig" rid="fig2">Figure 2</xref>); this indicated that TNFα treatment upregulates <italic>miR-363</italic> levels but reduces <italic>GATA6</italic> levels. As a result, the <italic>REG IV</italic> mRNA was significantly reduced in the colorectal cells [<xref ref-type="bibr" rid="B44">44</xref>].</p>
</sec>
<sec id="s6">
<title>LPS induced the <italic>REG IV</italic> gene in intestinal epithelial cells through downregulation of <italic>miR-24</italic></title>
<p id="p-27">Mucosal lesions in the intestine associated with IBD depend on the balance between damage and repair of the mucosal epithelium. Some <italic>REG</italic> family members (<italic>REG Iα</italic>, <italic>REG Iβ</italic>, and <italic>REG IV</italic>) are expressed in CD and UC epithelium and function as proliferative mucosal factors in CD and/or UC. <italic>REG Iα</italic> and <italic>REG Iβ</italic> were induced in the cell culture system by IL-6/IL-22 as described in the previous section. <italic>REG IV</italic> was also upregulated in CD and UC biopsy samples. However, <italic>REG IV</italic> upregulation/downregulation using IL-6, IL-22, or TNFα was not observed in the LS-174 and/or HT-29 cell culture system. We found that <italic>REG IV</italic> mRNA was significantly upregulated by 1 μg/mL lipopolysaccharide (LPS) in both LS-174 and HT-29 human intestinal epithelial cells. However, the other members of the human <italic>REG</italic> family (<italic>REG Iα</italic>, <italic>REG Iβ</italic>, <italic>REG III</italic>, and <italic>HIP/PAP</italic>) and a potential LPS receptor, receptor for advanced glycation endproducts (<italic>RAGE</italic>) were not upregulated by LPS.</p>
<p id="p-28">To determine whether REG IV is a growth factor/an anti-apoptotic factor in intestinal epithelial cells, we introduced <italic>siREG IV</italic> RNA into LS-174 and HT-29 cells for knocking-down <italic>REG IV</italic> and added LPS into the medium. LPS-induced cell proliferation was significantly inhibited by <italic>siREG IV</italic>-introduced cells, suggesting that REG IV was expressed in intestinal epithelial cells in response to LPS stimulation. Furthermore, it functions as a growth factor/an anti-apoptotic factor for intestinal epithelial cells in the presence of LPS [<xref ref-type="bibr" rid="B45">45</xref>]. LPS is a large molecule composed of lipids and polysaccharides. They consist of a covalently bound O antigen of eubacteria, an outer core, and an inner core and are present in the bacterial capsule (outermost membrane of the cell envelope) of gram-negative bacteria such as <italic>Escherichia coli</italic> (<italic>E. coli</italic>) and <italic>Salmonella enterica</italic> (formerly <italic>Salmonella choleraesuis</italic>). Intestinal inflammation is a host defense response to invading microbial toxins (such as LPS), which are important risk factors for colorectal cancer and IBD.</p>
<p id="p-29">Disruption of the mucosal barrier and failure of post-disruption regenerative proliferation are the primary mechanisms of intestinal inflammation. Intestinal inflammation thins the mucosal layer, reduces luminal coverage and adhesions, increases epithelial cell apoptosis and permeability, disrupts intestinal integrity by inhibiting cell proliferation, and leads to the loss of barrier function. This can ultimately lead to acute bowel dysfunction. In addition, intestinal mucosal dysfunction leads to the spread of metabolites, endotoxins, and bacteria, and the effects caused by enteric bacteremia exacerbate sepsis and multiple organ dysfunction syndrome. These results could well explain the recent results from Qi et al. [<xref ref-type="bibr" rid="B68">68</xref>] that <italic>Reg IV</italic> KO mice, produced via the CRISPR/Cas9 method, reduced complement bactericidal abilities against <italic>E. coli</italic>.</p>
<p id="p-30">To determine whether the LPS-induced increases in <italic>REG IV</italic> mRNAs in LS-174T and HT-29 intestinal cells were caused by transcriptional activation of the <italic>REG IV</italic> gene, a human <italic>REG IV</italic> promoter (–1053 to +22) was fused to the <italic>luciferase</italic> gene and transfected it into LS-174T and HT-29 human intestinal epithelial cells. After LPS stimulation, <italic>REG IV</italic> promoter activity was measured. As a result, LPS did not significantly increase the <italic>REG IV</italic> transcriptional activity in LS-174T or HT-29 human intestinal epithelial cells, suggesting that the upregulation of <italic>REG IV</italic> in response to LPS stimulation is not regulated by transcription [<xref ref-type="bibr" rid="B44">44</xref>, <xref ref-type="bibr" rid="B45">45</xref>]. A possible explanation was that the LPS-induced increase in <italic>REG IV</italic> expression is controlled post-transcriptionally. Therefore, we searched targeted miR for <italic>REG IV</italic> mRNA, which revealed that <italic>REG IV</italic> mRNA has a potential target sequence for <italic>miR-24</italic>.</p>
<p id="p-31">We then measured <italic>miR-24</italic> levels in LPS-treated and -untreated cells and found that the levels of <italic>miR-24</italic> in LPS-treated cells were significantly lower than those in vehicle-treated cells. To confirm whether <italic>REG IV</italic> expression in LPS-treated cells is controlled by the levels of <italic>miR-24</italic>, <italic>miR-24 mimic</italic> and <italic>miR-24 mimic NC</italic> were introduced into LS-174T and HT-29 intestinal epithelial cells. After LPS treatment, <italic>REG IV</italic> mRNA in the cells and REG IV protein secreted in the culture medium were significantly increased. <xref ref-type="fig" rid="fig3">Figure 3</xref> shows the LPS-induced increases in <italic>REG IV</italic> mRNA in the cells; REG IV protein in the culture medium was attenuated by the transfection of <italic>miR-24 mimic</italic> but not by control RNA (<italic>miR-24 mimic NC</italic>). These findings confirm that LPS downregulates the <italic>miR-24</italic> in human intestinal epithelial cells. As a result, the <italic>REG IV</italic> mRNA and secreted REG IV protein are increased through the <italic>miR-24</italic> mediated mechanism [<xref ref-type="bibr" rid="B45">45</xref>].</p>
<fig id="fig3" position="float">
<label>Figure 3</label>
<caption>
<p id="fig3-p-1">
<bold>A possible mechanism of <italic>REG</italic> family (<italic>REG I</italic><italic>α</italic>, <italic>REG I</italic><italic>β</italic>, and <italic>REG IV</italic>) gene upregulation in IBD.</bold> Upregulation of <italic>REG Iα</italic>, <italic>REG Iβ</italic>, and <italic>REG IV</italic> mRNAs may have two opposing features. The expression of REG Iα, REG Iβ, and REG IV could induce protection/recovery of the intestinal epithelium from immune-mediated damages (mainly by IL-22/IL-6) via intestinal epithelial cell proliferation by REG family proteins in IBD. LPS-induced REG IV expression via the reduction of <italic>miR-24</italic>. The LPS signal was mediated through cell surface RAGE and/or toll-like receptor 4 (TLR4) receptors [<xref ref-type="bibr" rid="B45">45</xref>]. In IBD conditions, damaged intestinal epithelial cells were replenished by proliferation. REG IV could induce the replication of intestinal epithelial cells [<xref ref-type="bibr" rid="B45">45</xref>]. However, it may sometimes result in a growing risk of colorectal cancer. Therefore, the long-lasting elevation of IL-22/IL-6 in serum and the IL-22/IL-6-induced upregulation of <italic>REG</italic> family genes in intestinal epithelial cells should be carefully monitored and controlled for healthy recovery of the intestinal epithelium in IBD patients. After the damaged intestinal epithelium is recovered, anti-IL-22/anti-IL-6 antibodies or antibodies against REG family proteins may be used as a new preventive therapy to minimize the risk of colorectal cancer in UC and CD patients. MZF1: myeloid zinc finger 1; RTEF1: related transcriptional enhancer factor-1; STAT3: related transcriptional enhancer factor-1; <italic>REG</italic>: regenerating gene; HLTF: helicase-like transcription factor; RAGE: receptor for advanced glycation endproducts; LPS: lipopolysaccharide</p>
</caption>
<graphic xmlns:xlink="http://www.w3.org/1999/xlink" xlink:href="em-06-1001278-g003.tif" />
</fig>
</sec>
<sec id="s7">
<title>Conclusions</title>
<p id="p-32">The expression of <italic>Reg</italic> family genes in IBD situation and their possible molecular mechanisms have been clarified, as described above. REG protein expression and circulating autoantibodies against the REG protein have also been reported in other autoimmune diseases such as diabetes [<xref ref-type="bibr" rid="B12">12</xref>] and Sjögren’s syndrome [<xref ref-type="bibr" rid="B49">49</xref>, <xref ref-type="bibr" rid="B51">51</xref>]. Until now, the possible involvement of autoantibodies against REG (Reg family) proteins in IBD and Celiac disease patients has been suggested [<xref ref-type="bibr" rid="B40">40</xref>]. Detection and measurement of autoantibodies against REG protein in patient serum has been developed using immunoblot analysis, with some modifications [<xref ref-type="bibr" rid="B12">12</xref>, <xref ref-type="bibr" rid="B49">49</xref>, <xref ref-type="bibr" rid="B69">69</xref>]. One microliter of patient serum is sufficient to detect and measure the autoantibodies against REG protein. We anticipate further analyses to detect/measure autoantibodies against the REG family proteins in IBD and immune-mediated intestinal/digestive organ diseases such as Celiac disease, immunodysregulation polyendocrinopathy enteropathy X-linked (IPEX) syndrome, autoimmune gastrointestinal dysmotility (AGID), primary biliary cholangitis (PBC), and autoimmune pancreatitis (AIP).</p>
</sec>
</body>
<back>
<glossary>
<title>Abbreviations</title>
<def-list>
<def-item>
<term>ATF-2</term>
<def>
<p>activating transcription factor 2</p>
</def>
</def-item>
<def-item>
<term>bFGF</term>
<def>
<p>basic fibroblast growth factor</p>
</def>
</def-item>
<def-item>
<term>BrdU</term>
<def>
<p>5’-bromo-2’-deoxyuridine</p>
</def>
</def-item>
<def-item>
<term>CD</term>
<def>
<p>Crohn’s disease</p>
</def>
</def-item>
<def-item>
<term>
<italic>CDX2</italic>
</term>
<def>
<p>caudal-type homeobox protein 2</p>
</def>
</def-item>
<def-item>
<term>DSS</term>
<def>
<p>dextran sulfate sodium</p>
</def>
</def-item>
<def-item>
<term>Dx</term>
<def>
<p>dexamethasone</p>
</def>
</def-item>
<def-item>
<term>
<italic>E. coli</italic>
</term>
<def>
<p> <italic>Escherichia coli</italic></p>
</def>
</def-item>
<def-item>
<term>EGF</term>
<def>
<p>epidermal growth factor</p>
</def>
</def-item>
<def-item>
<term>
<italic>EXT</italic>
</term>
<def>
<p>exostoses</p>
</def>
</def-item>
<def-item>
<term>
<italic>GATA6</italic>
</term>
<def>
<p>GATA-binding factor 6</p>
</def>
</def-item>
<def-item>
<term>HGF</term>
<def>
<p>hepatocyte growth factor</p>
</def>
</def-item>
<def-item>
<term>HLTF</term>
<def>
<p>helicase-like transcription factor</p>
</def>
</def-item>
<def-item>
<term>IBD</term>
<def>
<p>inflammatory bowel diseases</p>
</def>
</def-item>
<def-item>
<term>KO</term>
<def>
<p>knockout</p>
</def>
</def-item>
<def-item>
<term>miR</term>
<def>
<p>microRNA</p>
</def>
</def-item>
<def-item>
<term>MZF1</term>
<def>
<p>myeloid zinc finger 1</p>
</def>
</def-item>
<def-item>
<term>NOD</term>
<def>
<p>nonobese diabetic</p>
</def>
</def-item>
<def-item>
<term>NON</term>
<def>
<p>non-obese non-diabetic</p>
</def>
</def-item>
<def-item>
<term>PAPs</term>
<def>
<p>pancreatitis-associated proteins</p>
</def>
</def-item>
<def-item>
<term>PARP</term>
<def>
<p>poly(ADP-ribose) polymerase</p>
</def>
</def-item>
<def-item>
<term>PI(3)K</term>
<def>
<p>3-kinase</p>
</def>
</def-item>
<def-item>
<term>
<italic>RAGE</italic>
</term>
<def>
<p>receptor for advanced glycation endproducts</p>
</def>
</def-item>
<def-item>
<term>
<italic>Reg</italic>
</term>
<def>
<p>regenerating gene</p>
</def>
</def-item>
<def-item>
<term>RS</term>
<def>
<p>
<italic>REG</italic>-related sequence</p>
</def>
</def-item>
<def-item>
<term>RTEF1</term>
<def>
<p>related transcriptional enhancer factor-1</p>
</def>
</def-item>
<def-item>
<term>siRNA</term>
<def>
<p>small interfering RNA</p>
</def>
</def-item>
<def-item>
<term>
<italic>SOCS3</italic>
</term>
<def>
<p>suppressor of cytokine signaling 3</p>
</def>
</def-item>
<def-item>
<term>SPF</term>
<def>
<p>specific pathogen-free</p>
</def>
</def-item>
<def-item>
<term>STAT3</term>
<def>
<p>signal transducer and activator of transcription 3</p>
</def>
</def-item>
<def-item>
<term>TEAD4</term>
<def>
<p>TEA domain transcription factor 4</p>
</def>
</def-item>
<def-item>
<term>Tg</term>
<def>
<p>transgenic</p>
</def>
</def-item>
<def-item>
<term>TNF</term>
<def>
<p>tumor necrosis factor</p>
</def>
</def-item>
<def-item>
<term>UC</term>
<def>
<p>ulcerative colitis</p>
</def>
</def-item>
</def-list>
</glossary>
<sec id="s8">
<title>Declarations</title>
<sec id="t-8-1">
<title>Acknowledgments</title>
<p>We are indebted to Hiroshi Okamoto and Michiaki Unno (Tohoku University), Marta Vives-Pi (Universitat Autònoma de Barcelona), Chikatsugu Tsuchida, Sumiyo Sakuramoto-Tsuchida, Asako Itaya-Hironaka, Shuhei Nakamura, Chiho Ohbayashi, and Akihiko Yoshizawa (Nara Medical University) for encouragement.</p>
</sec>
<sec id="t-8-2">
<title>Author contributions</title>
<p>ST: Conceptualization, Writing—original draft, Writing—review &amp; editing, Supervision, Validation. TU and MK: Writing—review &amp; editing, Supervision, Validation. All authors read and approved the submitted version.</p>
</sec>
<sec id="t-8-3" sec-type="COI-statement">
<title>Conflicts of interest</title>
<p>The authors declare that they have no conflict of interest.</p>
</sec>
<sec id="t-8-4">
<title>Ethical approval</title>
<p>Not applicable.</p>
</sec>
<sec id="t-8-5">
<title>Consent to participate</title>
<p>Not applicable.</p>
</sec>
<sec id="t-8-6">
<title>Consent to publication</title>
<p>Not applicable.</p>
</sec>
<sec id="t-8-7" sec-type="data-availability">
<title>Availability of data and materials</title>
<p>Not applicable.</p>
</sec>
<sec id="t-8-8">
<title>Funding</title>
<p>This study is supported by in part by Grant-in-Aid for Scientific Research from the Ministry of Education, Culture, Sports, Science and Technology, Japan grant number [08102003] and Japan Society for the Promotion of Science, and Japan Science and Technology Agency. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.</p>
</sec>
<sec id="t-8-9">
<title>Copyright</title>
<p>© The Author(s) 2025.</p>
</sec>
</sec>
<sec id="s9">
<title>Publisher’s note</title>
<p>Open Exploration maintains a neutral stance on jurisdictional claims in published institutional affiliations and maps. All opinions expressed in this article are the personal views of the author(s) and do not represent the stance of the editorial team or the publisher.</p>
</sec>
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